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A Comparative Analysis between k-mers and Community Detection-based Features for the Task of Protein Classification

Machine learning algorithms are widely used to annotate biological sequences. Low-dimensional informative feature vectors can be crucial for the performance of the algorithms. In prior work, we have proposed the use of a community detection approach to construct low dimensional feature sets for nucl...

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Detalhes bibliográficos
Publicado no:IEEE Trans Nanobioscience
Main Authors: Tangirala, Karthik, Herndon, Nic, Caragea, Doina
Formato: Artigo
Idioma:Inglês
Publicado em: 2016
Assuntos:
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC6245644/
https://ncbi.nlm.nih.gov/pubmed/26863669
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1109/TNB.2016.2523501
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