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Comparing K-mer based methods for improved classification of 16S sequences

BACKGROUND: The need for precise and stable taxonomic classification is highly relevant in modern microbiology. Parallel to the explosion in the amount of sequence data accessible, there has also been a shift in focus for classification methods. Previously, alignment-based methods were the most appl...

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Publicat a:BMC Bioinformatics
Autors principals: Vinje, Hilde, Liland, Kristian Hovde, Almøy, Trygve, Snipen, Lars
Format: Artigo
Idioma:Inglês
Publicat: BioMed Central 2015
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Accés en línia:https://ncbi.nlm.nih.gov/pmc/articles/PMC4487979/
https://ncbi.nlm.nih.gov/pubmed/26130333
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/s12859-015-0647-4
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