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RefSeq database growth influences the accuracy of k-mer-based lowest common ancestor species identification

In order to determine the role of the database in taxonomic sequence classification, we examine the influence of the database over time on k-mer-based lowest common ancestor taxonomic classification. We present three major findings: the number of new species added to the NCBI RefSeq database greatly...

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Veröffentlicht in:Genome Biol
Hauptverfasser: Nasko, Daniel J., Koren, Sergey, Phillippy, Adam M., Treangen, Todd J.
Format: Artigo
Sprache:Inglês
Veröffentlicht: BioMed Central 2018
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Online Zugang:https://ncbi.nlm.nih.gov/pmc/articles/PMC6206640/
https://ncbi.nlm.nih.gov/pubmed/30373669
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/s13059-018-1554-6
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