Efficient computation of motif discovery on Intel Many Integrated Core (MIC) Architecture

BACKGROUND: Novel sequence motifs detection is becoming increasingly essential in computational biology. However, the high computational cost greatly constrains the efficiency of most motif discovery algorithms. RESULTS: In this paper, we accelerate MEME algorithm targeted on Intel Many Integrated C...

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Bibliografski detalji
Izdano u:BMC Bioinformatics
Glavni autori: Peng, Shaoliang, Cheng, Minxia, Huang, Kaiwen, Cui, YingBo, Zhang, Zhiqiang, Guo, Runxin, Zhang, Xiaoyu, Yang, Shunyun, Liao, Xiangke, Lu, Yutong, Zou, Quan, Shi, Benyun
Format: Artigo
Jezik:Inglês
Izdano: BioMed Central 2018
Teme:
Research
Online pristup:https://ncbi.nlm.nih.gov/pmc/articles/PMC6101076/
https://ncbi.nlm.nih.gov/pubmed/30367570
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/s12859-018-2276-1
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