MICA: A fast short-read aligner that takes full advantage of Many Integrated Core Architecture (MIC)

BACKGROUND: Short-read aligners have recently gained a lot of speed by exploiting the massive parallelism of GPU. An uprising alterative to GPU is Intel MIC; supercomputers like Tianhe-2, currently top of TOP500, is built with 48,000 MIC boards to offer ~55 PFLOPS. The CPU-like architecture of MIC a...

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Publicado en:BMC Bioinformatics
Autores principales: Luo, Ruibang, Cheung, Jeanno, Wu, Edward, Wang, Heng, Chan, Sze-Hang, Law, Wai-Chun, He, Guangzhu, Yu, Chang, Liu, Chi-Man, Zhou, Dazong, Li, Yingrui, Li, Ruiqiang, Wang, Jun, Zhu, Xiaoqian, Peng, Shaoliang, Lam, Tak-Wah
Formato: Artigo
Lenguaje:Inglês
Publicado: BioMed Central 2015
Materias:
Research
Acceso en línea:https://ncbi.nlm.nih.gov/pmc/articles/PMC4423751/
https://ncbi.nlm.nih.gov/pubmed/25952019
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/1471-2105-16-S7-S10
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