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cgpCaVEManWrapper: Simple Execution of CaVEMan in Order to Detect Somatic Single Nucleotide Variants in NGS Data

CaVEMan is an expectation maximization–based somatic substitution-detection algorithm that is written in C. The algorithm analyzes sequence data from a test sample, such as a tumor relative to a reference normal sample from the same patient and the reference genome. It performs a comparative analysi...

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Detalhes bibliográficos
Publicado no:Curr Protoc Bioinformatics
Main Authors: Jones, David, Raine, Keiran M., Davies, Helen, Tarpey, Patrick S., Butler, Adam P., Teague, Jon W., Nik-Zainal, Serena, Campbell, Peter J.
Formato: Artigo
Idioma:Inglês
Publicado em: 2016
Assuntos:
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC6097605/
https://ncbi.nlm.nih.gov/pubmed/27930805
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1002/cpbi.20
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