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GRIM-Filter: Fast seed location filtering in DNA read mapping using processing-in-memory technologies
BACKGROUND: Seed location filtering is critical in DNA read mapping, a process where billions of DNA fragments (reads) sampled from a donor are mapped onto a reference genome to identify genomic variants of the donor. State-of-the-art read mappers 1) quickly generate possible mapping locations for s...
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| 發表在: | BMC Genomics |
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| Main Authors: | , , , , , , , , , |
| 格式: | Artigo |
| 語言: | Inglês |
| 出版: |
BioMed Central
2018
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| 主題: | |
| 在線閱讀: | https://ncbi.nlm.nih.gov/pmc/articles/PMC5954284/ https://ncbi.nlm.nih.gov/pubmed/29764378 https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/s12864-018-4460-0 |
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