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PlasmidSeeker: identification of known plasmids from bacterial whole genome sequencing reads

BACKGROUND: Plasmids play an important role in the dissemination of antibiotic resistance, making their detection an important task. Using whole genome sequencing (WGS), it is possible to capture both bacterial and plasmid sequence data, but short read lengths make plasmid detection a complex proble...

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Detalhes bibliográficos
Publicado no:PeerJ
Main Authors: Roosaare, Märt, Puustusmaa, Mikk, Möls, Märt, Vaher, Mihkel, Remm, Maido
Formato: Artigo
Idioma:Inglês
Publicado em: PeerJ Inc. 2018
Assuntos:
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC5885972/
https://ncbi.nlm.nih.gov/pubmed/29629246
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.7717/peerj.4588
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