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PlasmidSeeker: identification of known plasmids from bacterial whole genome sequencing reads

BACKGROUND: Plasmids play an important role in the dissemination of antibiotic resistance, making their detection an important task. Using whole genome sequencing (WGS), it is possible to capture both bacterial and plasmid sequence data, but short read lengths make plasmid detection a complex proble...

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書目詳細資料
發表在:PeerJ
Main Authors: Roosaare, Märt, Puustusmaa, Mikk, Möls, Märt, Vaher, Mihkel, Remm, Maido
格式: Artigo
語言:Inglês
出版: PeerJ Inc. 2018
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在線閱讀:https://ncbi.nlm.nih.gov/pmc/articles/PMC5885972/
https://ncbi.nlm.nih.gov/pubmed/29629246
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.7717/peerj.4588
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