Abundance estimation and differential testing on strain level in metagenomics data

MOTIVATION: Current metagenomics approaches allow analyzing the composition of microbial communities at high resolution. Important changes to the composition are known to even occur on strain level and to go hand in hand with changes in disease or ecological state. However, specific challenges arise...

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Detalhes bibliográficos
Publicado no:Bioinformatics
Main Authors: Fischer, Martina, Strauch, Benjamin, Renard, Bernhard Y
Formato: Artigo
Idioma:Inglês
Publicado em: Oxford University Press 2017
Assuntos:
Ismb/Eccb 2017: The 25th Annual Conference Intelligent Systems for Molecular Biology Held Jointly with the 16th Annual European Conference on Computational Biology, Prague, Czech Republic, July 21–25, 2017
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC5870649/
https://ncbi.nlm.nih.gov/pubmed/28881972
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1093/bioinformatics/btx237
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