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Optimal compressed representation of high throughput sequence data via light assembly

The most effective genomic data compression methods either assemble reads into contigs, or replace them with their alignment positions on a reference genome. Such methods require significant computational resources, but faster alternatives that avoid using explicit or de novo-constructed references...

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Detalles Bibliográficos
Publicado en:Nat Commun
Main Authors: Ginart, Antonio A., Hui, Joseph, Zhu, Kaiyuan, Numanagić, Ibrahim, Courtade, Thomas A., Sahinalp, S. Cenk, Tse, David N.
Formato: Artigo
Idioma:Inglês
Publicado: Nature Publishing Group UK 2018
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Acceso en liña:https://ncbi.nlm.nih.gov/pmc/articles/PMC5805770/
https://ncbi.nlm.nih.gov/pubmed/29422526
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1038/s41467-017-02480-6
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