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Efficacy of Independence Sampling in Replica Exchange Simulations of Ordered and Disordered Proteins

Recasting temperature replica exchange (T-RE) as a special case of Gibbs sampling has led to a simple and efficient scheme for enhanced mixing (Chodera and Shirts, 2011). To critically examine if T-RE with independence sampling (T-REis) improves conformational sampling, we performed T-RE and T-REis...

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Detalhes bibliográficos
Publicado no:J Comput Chem
Main Authors: Lee, Kuo Hao, Chen, Jianhan
Formato: Artigo
Idioma:Inglês
Publicado em: 2017
Assuntos:
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC5752115/
https://ncbi.nlm.nih.gov/pubmed/28841239
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1002/jcc.24923
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