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On the (im)possibility of reconstructing plasmids from whole-genome short-read sequencing data
To benchmark algorithms for automated plasmid sequence reconstruction from short-read sequencing data, we selected 42 publicly available complete bacterial genome sequences spanning 12 genera, containing 148 plasmids. We predicted plasmids from short-read data with four programs (PlasmidSPAdes, Recy...
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| Gepubliceerd in: | Microb Genom |
|---|---|
| Hoofdauteurs: | , , , |
| Formaat: | Artigo |
| Taal: | Inglês |
| Gepubliceerd in: |
Microbiology Society
2017
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| Onderwerpen: | |
| Online toegang: | https://ncbi.nlm.nih.gov/pmc/articles/PMC5695206/ https://ncbi.nlm.nih.gov/pubmed/29177087 https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1099/mgen.0.000128 |
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