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Detecting large deletions at base pair level by combining split read and paired read data

BACKGROUND: Genomic structural variants (SV) play a significant role in the onset and progression of cancer. Genomic deletions can create oncogenic fusion genes or cause the loss of tumor suppressing gene function which can lead to tumorigenesis by downregulating these genes. Detecting these variant...

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Detalhes bibliográficos
Publicado no:BMC Bioinformatics
Main Authors: Hayes, Matthew, Pearson, Jeremy S.
Formato: Artigo
Idioma:Inglês
Publicado em: BioMed Central 2017
Assuntos:
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC5657039/
https://ncbi.nlm.nih.gov/pubmed/29072143
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/s12859-017-1829-z
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