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Traversing the k-mer Landscape of NGS Read Datasets for Quality Score Sparsification

It is becoming increasingly impractical to indefinitely store raw sequencing data for later processing in an uncompressed state. In this paper, we describe a scalable compressive framework, Read-Quality-Sparsifier (RQS), which substantially outperforms the compression ratio and speed of other de nov...

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Vydáno v:Res Comput Mol Biol
Hlavní autoři: Yu, Y. William, Yorukoglu, Deniz, Berger, Bonnie
Médium: Artigo
Jazyk:Inglês
Vydáno: 2014
Témata:
On-line přístup:https://ncbi.nlm.nih.gov/pmc/articles/PMC5558603/
https://ncbi.nlm.nih.gov/pubmed/28825060
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1007/978-3-319-05269-4_31
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