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ROCker: accurate detection and quantification of target genes in short-read metagenomic data sets by modeling sliding-window bitscores

Functional annotation of metagenomic and metatranscriptomic data sets relies on similarity searches based on e-value thresholds resulting in an unknown number of false positive and negative matches. To overcome these limitations, we introduce ROCker, aimed at identifying position-specific, most-disc...

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Detalhes bibliográficos
Publicado no:Nucleic Acids Res
Main Authors: Orellana, Luis H., Rodriguez-R, Luis M., Konstantinidis, Konstantinos T.
Formato: Artigo
Idioma:Inglês
Publicado em: Oxford University Press 2017
Assuntos:
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC5388429/
https://ncbi.nlm.nih.gov/pubmed/28180325
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1093/nar/gkw900
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