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SynthEx: a synthetic-normal-based DNA sequencing tool for copy number alteration detection and tumor heterogeneity profiling

Changes in the quantity of genetic material, known as somatic copy number alterations (CNAs), can drive tumorigenesis. Many methods exist for assessing CNAs using microarrays, but considerable technical issues limit current CNA calling based upon DNA sequencing. We present SynthEx, a novel tool for...

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Détails bibliographiques
Publié dans:Genome Biol
Auteurs principaux: Silva, Grace O., Siegel, Marni B., Mose, Lisle E., Parker, Joel S., Sun, Wei, Perou, Charles M., Chen, Mengjie
Format: Artigo
Langue:Inglês
Publié: BioMed Central 2017
Sujets:
Accès en ligne:https://ncbi.nlm.nih.gov/pmc/articles/PMC5385048/
https://ncbi.nlm.nih.gov/pubmed/28390427
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/s13059-017-1193-3
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