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A novel independence test for somatic alterations in cancer shows that biology drives mutual exclusivity but chance explains most co-occurrence

In cancer, mutually exclusive or co-occurring somatic alterations across genes can suggest functional interactions. Existing tests for such patterns make the unrealistic assumption of identical gene alteration probabilities across tumors. We present Discrete Independence Statistic Controlling for Ob...

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Detalhes bibliográficos
Publicado no:Genome Biol
Main Authors: Canisius, Sander, Martens, John W. M., Wessels, Lodewyk F. A.
Formato: Artigo
Idioma:Inglês
Publicado em: BioMed Central 2016
Assuntos:
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC5162102/
https://ncbi.nlm.nih.gov/pubmed/27986087
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/s13059-016-1114-x
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