A multi-center study benchmarks software tools for label-free proteome quantification

The consistent and accurate quantification of proteins by mass spectrometry (MS)-based proteomics depends on the performance of instruments, acquisition methods and data analysis software. In collaboration with the software developers, we evaluated OpenSWATH, SWATH2.0, Skyline, Spectronaut and DIA-U...

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Udgivet i:Nat Biotechnol
Main Authors: Navarro, Pedro, Kuharev, Jörg, Gillet, Ludovic C, Bernhardt, Oliver M., MacLean, Brendan, Röst, Hannes L., Tate, Stephen A., Tsou, Chih-Chiang, Reiter, Lukas, Distler, Ute, Rosenberger, George, Perez-Riverol, Yasset, Nesvizhskii, Alexey I., Aebersold, Ruedi, Tenzer, Stefan
Format: Artigo
Sprog:Inglês
Udgivet: 2016
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Article
Online adgang:https://ncbi.nlm.nih.gov/pmc/articles/PMC5120688/
https://ncbi.nlm.nih.gov/pubmed/27701404
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1038/nbt.3685
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