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Choosing panels of genomics assays using submodular optimization

Due to the high cost of sequencing-based genomics assays such as ChIP-seq and DNase-seq, the epigenomic characterization of a cell type is typically carried out using a small panel of assay types. Deciding a priori which assays to perform is, thus, a critical step in many studies. We present the sub...

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Bibliografiske detaljer
Udgivet i:Genome Biol
Main Authors: Wei, Kai, Libbrecht, Maxwell W., Bilmes, Jeffrey A., Noble, William Stafford
Format: Artigo
Sprog:Inglês
Udgivet: BioMed Central 2016
Fag:
Online adgang:https://ncbi.nlm.nih.gov/pmc/articles/PMC5111315/
https://ncbi.nlm.nih.gov/pubmed/27846892
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/s13059-016-1089-7
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