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Multiensemble Markov models of molecular thermodynamics and kinetics

We introduce the general transition-based reweighting analysis method (TRAM), a statistically optimal approach to integrate both unbiased and biased molecular dynamics simulations, such as umbrella sampling or replica exchange. TRAM estimates a multiensemble Markov model (MEMM) with full thermodynam...

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Detalhes bibliográficos
Publicado no:Proc Natl Acad Sci U S A
Main Authors: Wu, Hao, Paul, Fabian, Wehmeyer, Christoph, Noé, Frank
Formato: Artigo
Idioma:Inglês
Publicado em: National Academy of Sciences 2016
Assuntos:
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC4988570/
https://ncbi.nlm.nih.gov/pubmed/27226302
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1073/pnas.1525092113
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