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GPU-Acceleration of Sequence Homology Searches with Database Subsequence Clustering

Sequence homology searches are used in various fields and require large amounts of computation time, especially for metagenomic analysis, owing to the large number of queries and the database size. To accelerate computing analyses, graphics processing units (GPUs) are widely used as a low-cost, high...

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Detalhes bibliográficos
Publicado no:PLoS One
Main Authors: Suzuki, Shuji, Kakuta, Masanori, Ishida, Takashi, Akiyama, Yutaka
Formato: Artigo
Idioma:Inglês
Publicado em: Public Library of Science 2016
Assuntos:
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC4970815/
https://ncbi.nlm.nih.gov/pubmed/27482905
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1371/journal.pone.0157338
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