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GPU-Acceleration of Sequence Homology Searches with Database Subsequence Clustering

Sequence homology searches are used in various fields and require large amounts of computation time, especially for metagenomic analysis, owing to the large number of queries and the database size. To accelerate computing analyses, graphics processing units (GPUs) are widely used as a low-cost, high...

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Publicado en:PLoS One
Main Authors: Suzuki, Shuji, Kakuta, Masanori, Ishida, Takashi, Akiyama, Yutaka
Formato: Artigo
Idioma:Inglês
Publicado: Public Library of Science 2016
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Acceso en liña:https://ncbi.nlm.nih.gov/pmc/articles/PMC4970815/
https://ncbi.nlm.nih.gov/pubmed/27482905
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1371/journal.pone.0157338
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