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Integrating molecular dynamics simulations with chemical probing experiments using SHAPE-FIT

Integration and calibration of molecular dynamics simulations with experimental data remains a challenging endeavor. We have developed a novel method to integrate chemical probing experiments with molecular simulations of RNA molecules by using a native structure-based model. Selective 2’-hydroxyl a...

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Podrobná bibliografie
Vydáno v:Methods Enzymol
Hlavní autoři: Kirmizialtin, Serdal, Hennelly, Scott P., Schug, Alexander, Onuchic, Jose N., Sanbonmatsu, Karissa Y.
Médium: Artigo
Jazyk:Inglês
Vydáno: 2015
Témata:
On-line přístup:https://ncbi.nlm.nih.gov/pmc/articles/PMC4777697/
https://ncbi.nlm.nih.gov/pubmed/25726467
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1016/bs.mie.2014.10.061
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