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ScanIndel: a hybrid framework for indel detection via gapped alignment, split reads and de novo assembly

Comprehensive identification of insertions/deletions (indels) across the full size spectrum from second generation sequencing is challenging due to the relatively short read length inherent in the technology. Different indel calling methods exist but are limited in detection to specific sizes with v...

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Detalhes bibliográficos
Publicado no:Genome Med
Main Authors: Yang, Rendong, Nelson, Andrew C., Henzler, Christine, Thyagarajan, Bharat, Silverstein, Kevin A. T.
Formato: Artigo
Idioma:Inglês
Publicado em: BioMed Central 2015
Assuntos:
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC4671222/
https://ncbi.nlm.nih.gov/pubmed/26643039
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/s13073-015-0251-2
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