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ScanIndel: a hybrid framework for indel detection via gapped alignment, split reads and de novo assembly

Comprehensive identification of insertions/deletions (indels) across the full size spectrum from second generation sequencing is challenging due to the relatively short read length inherent in the technology. Different indel calling methods exist but are limited in detection to specific sizes with v...

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Bibliografski detalji
Izdano u:Genome Med
Glavni autori: Yang, Rendong, Nelson, Andrew C., Henzler, Christine, Thyagarajan, Bharat, Silverstein, Kevin A. T.
Format: Artigo
Jezik:Inglês
Izdano: BioMed Central 2015
Teme:
Online pristup:https://ncbi.nlm.nih.gov/pmc/articles/PMC4671222/
https://ncbi.nlm.nih.gov/pubmed/26643039
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/s13073-015-0251-2
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