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GenomeTester4: a toolkit for performing basic set operations - union, intersection and complement on k-mer lists

BACKGROUND: K-mer-based methods of genome analysis have attracted great interest because they do not require genome assembly and can be performed directly on sequencing reads. Many analysis tasks require one to compare k-mer lists from different sequences to find words that are either unique to a sp...

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Detalhes bibliográficos
Publicado no:Gigascience
Main Authors: Kaplinski, Lauris, Lepamets, Maarja, Remm, Maido
Formato: Artigo
Idioma:Inglês
Publicado em: BioMed Central 2015
Assuntos:
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC4669650/
https://ncbi.nlm.nih.gov/pubmed/26640690
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/s13742-015-0097-y
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