Wellington-bootstrap: differential DNase-seq footprinting identifies cell-type determining transcription factors

BACKGROUND: The analysis of differential gene expression is a fundamental tool to relate gene regulation with specific biological processes. Differential binding of transcription factors (TFs) can drive differential gene expression. While DNase-seq data can provide global snapshots of TF binding, to...

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Shranjeno v:
Bibliografske podrobnosti
izdano v:BMC Genomics
Main Authors: Piper, Jason, Assi, Salam A., Cauchy, Pierre, Ladroue, Christophe, Cockerill, Peter N., Bonifer, Constanze, Ott, Sascha
Format: Artigo
Jezik:Inglês
Izdano: BioMed Central 2015
Teme:
Methodology Article
Online dostop:https://ncbi.nlm.nih.gov/pmc/articles/PMC4658755/
https://ncbi.nlm.nih.gov/pubmed/26608661
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/s12864-015-2081-4
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