The Gap Procedure: for the identification of phylogenetic clusters in HIV-1 sequence data

BACKGROUND: In the context of infectious disease, sequence clustering can be used to provide important insights into the dynamics of transmission. Cluster analysis is usually performed using a phylogenetic approach whereby clusters are assigned on the basis of sufficiently small genetic distances an...

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Vydáno v:BMC Bioinformatics
Hlavní autoři: Vrbik, Irene, Stephens, David A., Roger, Michel, Brenner, Bluma G.
Médium: Artigo
Jazyk:Inglês
Vydáno: BioMed Central 2015
Témata:
Methodology
On-line přístup:https://ncbi.nlm.nih.gov/pmc/articles/PMC4634160/
https://ncbi.nlm.nih.gov/pubmed/26538192
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/s12859-015-0791-x
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