ISMapper: identifying transposase insertion sites in bacterial genomes from short read sequence data

BACKGROUND: Insertion sequences (IS) are small transposable elements, commonly found in bacterial genomes. Identifying the location of IS in bacterial genomes can be useful for a variety of purposes including epidemiological tracking and predicting antibiotic resistance. However IS are commonly pres...

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Pubblicato in:BMC Genomics
Autori principali: Hawkey, Jane, Hamidian, Mohammad, Wick, Ryan R., Edwards, David J., Billman-Jacobe, Helen, Hall, Ruth M., Holt, Kathryn E.
Natura: Artigo
Lingua:Inglês
Pubblicazione: BioMed Central 2015
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Software
Accesso online:https://ncbi.nlm.nih.gov/pmc/articles/PMC4558774/
https://ncbi.nlm.nih.gov/pubmed/26336060
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/s12864-015-1860-2
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