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A convex formulation for joint RNA isoform detection and quantification from multiple RNA-seq samples
BACKGROUND: Detecting and quantifying isoforms from RNA-seq data is an important but challenging task. The problem is often ill-posed, particularly at low coverage. One promising direction is to exploit several samples simultaneously. RESULTS: We propose a new method for solving the isoform deconvol...
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| Опубликовано в: : | BMC Bioinformatics |
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| Главные авторы: | , , , , |
| Формат: | Artigo |
| Язык: | Inglês |
| Опубликовано: |
BioMed Central
2015
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| Предметы: | |
| Online-ссылка: | https://ncbi.nlm.nih.gov/pmc/articles/PMC4543468/ https://ncbi.nlm.nih.gov/pubmed/26286719 https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/s12859-015-0695-9 |
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