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SuRankCo: supervised ranking of contigs in de novo assemblies

BACKGROUND: Evaluating the quality and reliability of a de novo assembly and of single contigs in particular is challenging since commonly a ground truth is not readily available and numerous factors may influence results. Currently available procedures provide assembly scores but lack a comparative...

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Bibliografiske detaljer
Udgivet i:BMC Bioinformatics
Main Authors: Kuhring, Mathias, Dabrowski, Piotr Wojtek, Piro, Vitor C., Nitsche, Andreas, Renard, Bernhard Y.
Format: Artigo
Sprog:Inglês
Udgivet: BioMed Central 2015
Fag:
Online adgang:https://ncbi.nlm.nih.gov/pmc/articles/PMC4520199/
https://ncbi.nlm.nih.gov/pubmed/26224355
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/s12859-015-0644-7
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