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Refinement by shifting secondary structure elements improves sequence alignments

Constructing a model of a query protein based on its alignment to a homolog with experimentally determined spatial structure (the template) is still the most reliable approach to structure prediction. Alignment errors are the main bottleneck for homology modeling when the query is distantly related...

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Détails bibliographiques
Publié dans:Proteins
Auteurs principaux: Tong, Jing, Pei, Jimin, Otwinowski, Zbyszek, Grishin, Nick V.
Format: Artigo
Langue:Inglês
Publié: 2015
Sujets:
Accès en ligne:https://ncbi.nlm.nih.gov/pmc/articles/PMC4501258/
https://ncbi.nlm.nih.gov/pubmed/25546158
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1002/prot.24746
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