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Optimally choosing PWM motif databases and sequence scanning approaches based on ChIP-seq data

BACKGROUND: For many years now, binding preferences of Transcription Factors have been described by so called motifs, usually mathematically defined by position weight matrices or similar models, for the purpose of predicting potential binding sites. However, despite the availability of thousands of...

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Detalhes bibliográficos
Publicado no:BMC Bioinformatics
Main Authors: Dabrowski, Michal, Dojer, Norbert, Krystkowiak, Izabella, Kaminska, Bozena, Wilczynski, Bartek
Formato: Artigo
Idioma:Inglês
Publicado em: BioMed Central 2015
Assuntos:
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC4436866/
https://ncbi.nlm.nih.gov/pubmed/25927199
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/s12859-015-0573-5
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