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Peptide Binding to a PDZ Domain by Electrostatic Steering via Nonnative Salt Bridges

We have captured the binding of a peptide to a PDZ domain by unbiased molecular dynamics simulations. Analysis of the trajectories reveals on-pathway encounter complex formation, which is driven by electrostatic interactions between negatively charged carboxylate groups in the peptide and positively...

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Detalles Bibliográficos
Publicado en:Biophys J
Main Authors: Blöchliger, Nicolas, Xu, Min, Caflisch, Amedeo
Formato: Artigo
Idioma:Inglês
Publicado: The Biophysical Society 2015
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Acceso en liña:https://ncbi.nlm.nih.gov/pmc/articles/PMC4423040/
https://ncbi.nlm.nih.gov/pubmed/25954893
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1016/j.bpj.2015.03.038
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