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Acceleration of discrete stochastic biochemical simulation using GPGPU

For systems made up of a small number of molecules, such as a biochemical network in a single cell, a simulation requires a stochastic approach, instead of a deterministic approach. The stochastic simulation algorithm (SSA) simulates the stochastic behavior of a spatially homogeneous system. Since s...

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發表在:Front Physiol
Main Authors: Sumiyoshi, Kei, Hirata, Kazuki, Hiroi, Noriko, Funahashi, Akira
格式: Artigo
語言:Inglês
出版: Frontiers Media S.A. 2015
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在線閱讀:https://ncbi.nlm.nih.gov/pmc/articles/PMC4327578/
https://ncbi.nlm.nih.gov/pubmed/25762936
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.3389/fphys.2015.00042
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