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BESST - Efficient scaffolding of large fragmented assemblies

BACKGROUND: The use of short reads from High Throughput Sequencing (HTS) techniques is now commonplace in de novo assembly. Yet, obtaining contiguous assemblies from short reads is challenging, thus making scaffolding an important step in the assembly pipeline. Different algorithms have been propose...

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Detalhes bibliográficos
Publicado no:BMC Bioinformatics
Main Authors: Sahlin, Kristoffer, Vezzi, Francesco, Nystedt, Björn, Lundeberg, Joakim, Arvestad, Lars
Formato: Artigo
Idioma:Inglês
Publicado em: BioMed Central 2014
Assuntos:
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC4262078/
https://ncbi.nlm.nih.gov/pubmed/25128196
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/1471-2105-15-281
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