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Lighter: fast and memory-efficient sequencing error correction without counting
Lighter is a fast, memory-efficient tool for correcting sequencing errors. Lighter avoids counting k-mers. Instead, it uses a pair of Bloom filters, one holding a sample of the input k-mers and the other holding k-mers likely to be correct. As long as the sampling fraction is adjusted in inverse pro...
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| Pubblicato in: | Genome Biol |
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| Autori principali: | , , |
| Natura: | Artigo |
| Lingua: | Inglês |
| Pubblicazione: |
BioMed Central
2014
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| Soggetti: | |
| Accesso online: | https://ncbi.nlm.nih.gov/pmc/articles/PMC4248469/ https://ncbi.nlm.nih.gov/pubmed/25398208 https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/s13059-014-0509-9 |
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