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Automated analysis of phylogenetic clusters

BACKGROUND: As sequence data sets used for the investigation of pathogen transmission patterns increase in size, automated tools and standardized methods for cluster analysis have become necessary. We have developed an automated Cluster Picker which identifies monophyletic clades meeting user-input...

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Publicat a:BMC Bioinformatics
Autors principals: Ragonnet-Cronin, Manon, Hodcroft, Emma, Hué, Stéphane, Fearnhill, Esther, Delpech, Valerie, Brown, Andrew J Leigh, Lycett, Samantha
Format: Artigo
Idioma:Inglês
Publicat: BioMed Central 2013
Matèries:
Accés en línia:https://ncbi.nlm.nih.gov/pmc/articles/PMC4228337/
https://ncbi.nlm.nih.gov/pubmed/24191891
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/1471-2105-14-317
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