bammds: a tool for assessing the ancestry of low-depth whole-genome data using multidimensional scaling (MDS)

Summary: We present bammds, a practical tool that allows visualization of samples sequenced by second-generation sequencing when compared with a reference panel of individuals (usually genotypes) using a multidimensional scaling algorithm. Our tool is aimed at determining the ancestry of unknown sam...

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Hauptverfasser: Malaspinas, Anna-Sapfo, Tange, Ole, Moreno-Mayar, José Víctor, Rasmussen, Morten, DeGiorgio, Michael, Wang, Yong, Valdiosera, Cristina E., Politis, Gustavo, Willerslev, Eske, Nielsen, Rasmus
Format: Artigo
Sprache:Inglês
Veröffentlicht: Oxford University Press 2014
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Applications Notes
Online Zugang:https://ncbi.nlm.nih.gov/pmc/articles/PMC4184259/
https://ncbi.nlm.nih.gov/pubmed/24974206
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1093/bioinformatics/btu410
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