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SAMBLASTER: fast duplicate marking and structural variant read extraction

Motivation: Illumina DNA sequencing is now the predominant source of raw genomic data, and data volumes are growing rapidly. Bioinformatic analysis pipelines are having trouble keeping pace. A common bottleneck in such pipelines is the requirement to read, write, sort and compress large BAM files mu...

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Detalhes bibliográficos
Main Authors: Faust, Gregory G., Hall, Ira M.
Formato: Artigo
Idioma:Inglês
Publicado em: Oxford University Press 2014
Assuntos:
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC4147885/
https://ncbi.nlm.nih.gov/pubmed/24812344
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1093/bioinformatics/btu314
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