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Multicore and GPU algorithms for Nussinov RNA folding

BACKGROUND: One segment of a RNA sequence might be paired with another segment of the same RNA sequence due to the force of hydrogen bonds. This two-dimensional structure is called the RNA sequence's secondary structure. Several algorithms have been proposed to predict an RNA sequence's se...

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Detalhes bibliográficos
Main Authors: Li, Junjie, Ranka, Sanjay, Sahni, Sartaj
Formato: Artigo
Idioma:Inglês
Publicado em: BioMed Central 2014
Assuntos:
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC4120147/
https://ncbi.nlm.nih.gov/pubmed/25082539
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/1471-2105-15-S8-S1
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