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Enhanced Regulatory Sequence Prediction Using Gapped k-mer Features

Oligomers of length k, or k-mers, are convenient and widely used features for modeling the properties and functions of DNA and protein sequences. However, k-mers suffer from the inherent limitation that if the parameter k is increased to resolve longer features, the probability of observing any spec...

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Bibliografiske detaljer
Main Authors: Ghandi, Mahmoud, Lee, Dongwon, Mohammad-Noori, Morteza, Beer, Michael A.
Format: Artigo
Sprog:Inglês
Udgivet: Public Library of Science 2014
Fag:
Online adgang:https://ncbi.nlm.nih.gov/pmc/articles/PMC4102394/
https://ncbi.nlm.nih.gov/pubmed/25033408
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1371/journal.pcbi.1003711
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