A multi-split mapping algorithm for circular RNA, splicing, trans-splicing and fusion detection

Numerous high-throughput sequencing studies have focused on detecting conventionally spliced mRNAs in RNA-seq data. However, non-standard RNAs arising through gene fusion, circularization or trans-splicing are often neglected. We introduce a novel, unbiased algorithm to detect splice junctions from...

Popoln opis

Shranjeno v:
Bibliografske podrobnosti
Main Authors: Hoffmann, Steve, Otto, Christian, Doose, Gero, Tanzer, Andrea, Langenberger, David, Christ, Sabina, Kunz, Manfred, Holdt, Lesca M, Teupser, Daniel, Hackermüller, Jörg, Stadler, Peter F
Format: Artigo
Jezik:Inglês
Izdano: BioMed Central 2014
Teme:
Method
Online dostop:https://ncbi.nlm.nih.gov/pmc/articles/PMC4056463/
https://ncbi.nlm.nih.gov/pubmed/24512684
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/gb-2014-15-2-r34
Oznake: Označite
Brez oznak, prvi označite!

Podobne knjige/članki