SOAPfuse: an algorithm for identifying fusion transcripts from paired-end RNA-Seq data

We have developed a new method, SOAPfuse, to identify fusion transcripts from paired-end RNA-Seq data. SOAPfuse applies an improved partial exhaustion algorithm to construct a library of fusion junction sequences, which can be used to efficiently identify fusion events, and employs a series of filte...

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Detalhes bibliográficos
Main Authors: Jia, Wenlong, Qiu, Kunlong, He, Minghui, Song, Pengfei, Zhou, Quan, Zhou, Feng, Yu, Yuan, Zhu, Dandan, Nickerson, Michael L, Wan, Shengqing, Liao, Xiangke, Zhu, Xiaoqian, Peng, Shaoliang, Li, Yingrui, Wang, Jun, Guo, Guangwu
Formato: Artigo
Idioma:Inglês
Publicado em: BioMed Central 2013
Assuntos:
Method
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC4054009/
https://ncbi.nlm.nih.gov/pubmed/23409703
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/gb-2013-14-2-r12
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