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The Impacts of Read Length and Transcriptome Complexity for De Novo Assembly: A Simulation Study

Transcriptome assembly using RNA-seq data - particularly in non-model organisms has been dramatically improved, but only recently have the pre-assembly procedures, such as sequencing depth and error correction, been studied. Increasing read length is viewed as a crucial condition to further improve...

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Hlavní autoři: Chang, Zheng, Wang, Zhenjia, Li, Guojun
Médium: Artigo
Jazyk:Inglês
Vydáno: Public Library of Science 2014
Témata:
On-line přístup:https://ncbi.nlm.nih.gov/pmc/articles/PMC3988101/
https://ncbi.nlm.nih.gov/pubmed/24736633
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1371/journal.pone.0094825
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