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Correction of sequence-dependent ambiguous bases (Ns) from the 454 pyrosequencing system

Pyrosequencing of the 16S ribosomal RNA gene (16S) has become one of the most popular methods to assess microbial diversity. Pyrosequencing reads containing ambiguous bases (Ns) are generally discarded based on the assumptions of their non-sequence-dependent formation and high error rates. However,...

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Bibliografiske detaljer
Main Authors: Shin, Sunguk, Park, Joonhong
Format: Artigo
Sprog:Inglês
Udgivet: Oxford University Press 2014
Fag:
Online adgang:https://ncbi.nlm.nih.gov/pmc/articles/PMC3985643/
https://ncbi.nlm.nih.gov/pubmed/24464999
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1093/nar/gku070
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