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Computing the Probability of RNA Hairpin and Multiloop Formation
We describe four novel algorithms, RNAhairpin, RNAmloopNum, RNAmloopOrder, and RNAmloopHP, which compute the Boltzmann partition function for global structural constraints—respectively for the number of hairpins, the number of multiloops, maximum order (or depth) of multiloops, and the simultaneous...
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| Main Authors: | , , , , |
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| Format: | Artigo |
| Sprog: | Inglês |
| Udgivet: |
Mary Ann Liebert, Inc.
2014
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| Fag: | |
| Online adgang: | https://ncbi.nlm.nih.gov/pmc/articles/PMC3948487/ https://ncbi.nlm.nih.gov/pubmed/24559086 https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1089/cmb.2013.0148 |
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