Using the Fast Fourier Transform to Accelerate the Computational Search for RNA Conformational Switches

Using complex roots of unity and the Fast Fourier Transform, we design a new thermodynamics-based algorithm, FFTbor, that computes the Boltzmann probability that secondary structures differ by [Image: see text] base pairs from an arbitrary initial structure of a given RNA sequence. The algorithm, wh...

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Detaylı Bibliyografya
Asıl Yazarlar: Senter, Evan, Sheikh, Saad, Dotu, Ivan, Ponty, Yann, Clote, Peter
Materyal Türü: Artigo
Dil:Inglês
Baskı/Yayın Bilgisi: Public Library of Science 2012
Konular:
Research Article
Online Erişim:https://ncbi.nlm.nih.gov/pmc/articles/PMC3526635/
https://ncbi.nlm.nih.gov/pubmed/23284639
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1371/journal.pone.0050506
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