Identification of pathogen genomic variants through an integrated pipeline

BACKGROUND: Whole-genome sequencing represents a powerful experimental tool for pathogen research. We present methods for the analysis of small eukaryotic genomes, including a streamlined system (called Platypus) for finding single nucleotide and copy number variants as well as recombination events....

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Hoofdauteurs: Manary, Micah J, Singhakul, Suriya S, Flannery, Erika L, Bopp, Selina ER, Corey, Victoria C, Bright, Andrew Taylor, McNamara, Case W, Walker, John R, Winzeler, Elizabeth A
Formaat: Artigo
Taal:Inglês
Gepubliceerd in: BioMed Central 2014
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Online toegang:https://ncbi.nlm.nih.gov/pmc/articles/PMC3945619/
https://ncbi.nlm.nih.gov/pubmed/24589256
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/1471-2105-15-63
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