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Classification of pmoA amplicon pyrosequences using BLAST and the lowest common ancestor method in MEGAN
The classification of high-throughput sequencing data of protein-encoding genes is not as well established as for 16S rRNA. The objective of this work was to develop a simple and accurate method of classifying large datasets of pmoA sequences, a common marker for methanotrophic bacteria. A taxonomic...
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Main Authors: | , , , |
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Formato: | Artigo |
Idioma: | Inglês |
Publicado em: |
Frontiers Media S.A.
2014
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Assuntos: | |
Acesso em linha: | https://ncbi.nlm.nih.gov/pmc/articles/PMC3927136/ https://ncbi.nlm.nih.gov/pubmed/22558000 https://ncbi.nlm.nih.govhttp://dx.doi.org/10.3389/fmicb.2014.00034 |
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