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The Distribution of Word Matches Between Markovian Sequences with Periodic Boundary Conditions

Word match counts have traditionally been proposed as an alignment-free measure of similarity for biological sequences. The D(2) statistic, which simply counts the number of exact word matches between two sequences, is a useful test bed for developing rigorous mathematical results, which can then be...

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Autori principali: Burden, Conrad J., Leopardi, Paul, Forêt, Sylvain
Natura: Artigo
Lingua:Inglês
Pubblicazione: Mary Ann Liebert, Inc. 2014
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Accesso online:https://ncbi.nlm.nih.gov/pmc/articles/PMC3880068/
https://ncbi.nlm.nih.gov/pubmed/24160839
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1089/cmb.2012.0277
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