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Replica Exchange Improves Sampling in Low-Resolution Docking Stage of RosettaDock

Many protein-protein docking protocols are based on a shotgun approach, in which thousands of independent random-start trajectories minimize the rigid-body degrees of freedom. Another strategy is enumerative sampling as used in ZDOCK. Here, we introduce an alternative strategy, ReplicaDock, using a...

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Détails bibliographiques
Auteurs principaux: Zhang, Zhe, Lange, Oliver F.
Format: Artigo
Langue:Inglês
Publié: Public Library of Science 2013
Sujets:
Accès en ligne:https://ncbi.nlm.nih.gov/pmc/articles/PMC3756964/
https://ncbi.nlm.nih.gov/pubmed/24009670
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1371/journal.pone.0072096
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